Browse of TCMCG006C68234 protein

CDS

Accession Number	TCMCG006C68234
gbkey	CDS
Protein Id	XP_013708810.1
Location	complement(join(15924986..15925042,15925460..15927118,15927236..15927715,15928003..15928207,15928550..15930486,15930568..15930639,15930722..15930808,15930935..15931264))
Gene	LOC106412435
GeneID	106412435
Organism	Brassica napus

Protein

Length	1608aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013853356.2
Definition	protein SHORTAGE IN CHIASMATA 1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	-
Description	-
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000280        [VIEW IN EMBL-EBI] GO:0000712        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0007127        [VIEW IN EMBL-EBI] GO:0007131        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0035825        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0045132        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048285        [VIEW IN EMBL-EBI] GO:0051304        [VIEW IN EMBL-EBI] GO:0051307        [VIEW IN EMBL-EBI] GO:0051321        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0061982        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0098813        [VIEW IN EMBL-EBI] GO:0140013        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCGAGGTCGATTTCTCAACATCGACTACTTCTCTACTCCGCCTTCTCAGGTTTACGAAGCCCTAGGCTTCCTCAATCTCCCAGCTCCCGATGATTTCCCGGCTCCTCTCTTCCGCGACCCGAGAGAAGAGTTTCTTCGATTCGAACCTATCGAAGGCTTCTCTCTCCCGATCGATAATCTCCCTATCGGAGATGCGTTGTCGAAGTTCCTCTCCGACGTGGTTCCCGATCGCGTCACCGTCGACTACGGAGCTTTCGAGATGGATTACTCTTCCCTCGGAGACGAGCTGAGGTTTATTCTCGGCCGTGGAGATCCTCAGTTCCTCGAGAAGAGTGAAGGAGAGGCCACTGAGGAGAAAGTTACACTAGATTTGAACATTGTTCAGCTGGAGACTCCAGAGATGGATTTAGAAATGGAGAATAAGCTCTCATCCAATATCGAGGATCTACAATGTCTCTCTAAAGTTCTAGAGATCGAAAATGAGCCGGTTAAGTTCGAGGAGTCAGATGTTATCCTACAGAACTCAAGCGACATCAAACAAAAGATTTATTCTGTTGATTGCATTTCTTCTGATTACTTCACAGAGAACAGTACTTCGGTGAAAGAAGATGAATGCTTCCGCAAGAATCGACCATGGTTCAGAGATGCTGTATTTCCCCTTCTTGAAGTGGATGAAGTAAACTTGAACGAACTATCAAGCTTGTCTATGCTTGATAAAATATTTTCTGTTCTCGAAACGATTGAGCCCAGAGATTTGGATACAGAGAGTTCTCTCGTTATCAACCCTAAGGAGCTTATAGGCTCTAAGGATTATGATCTATTGGATATCCTCTCCACGGATTGCTATTCAAACAAGAGTGTCCAGTCTGATGTGGTACCAGAGGAAATTGATATAGTGACTATCTTGGAAATACCAAATCCTGAGGAAAGCTTTCAGTTTGAACAGGGGAAGCTGGCTGTTGATGTGGTCTCGGTAGATTTTGAGGAAGTTCAGATCTTGGATGTGGAGATATCTGATGTTTTTGGTAGCTTCCTTTCTCTTCCACAAGCCGCTGAGCCAGAAATATGTCCCGGGATGTTCAGTGAAGAGATGAACTTCAAGAATTTCGATGAGTTAGTTGTCAGTTCTGAACTTGCCTTCGCAGATGATGCCTTTAAGTCTATGCCTACTCCTATCTTAAATGATTATGAGATAACAAGATCTCTGGAACTCATTTATGAGAATTATTTGTCAAAGATCAAGCCTCAAGAGTTTCCGGCATCAAATGACATATACTTGCCGTTGAACCTTCTTGAGGAGACAAAGCACAACCATGAAGCCCATTTTTGTGATTATCTGTCTGAAGAAATAGTTACATGCAACATTGATTATGATTTGGAATCTTTAGAAGGAGATAGATGGGTTTATGATTTCGTGCTCTCTGAAGATGTTTTCTGCGAGCCACTTGTAGAGAGATGCACTGAACCTTTTTATGGTATATCTACCCTTGATGAGCACCCTCCAGTCAATACTTCTCATGGGTTATTGGAACGCCTTTGTCCAGAAACAGGCTCCCGGGATTGTGGAAGGGATGATTACGCTAAAAAGGCTGCCCTGGTGTTCAAATCAATGTCTGCTTTTGATGACTTAACTTTTTTCATGGATCCTCAGAAAGCTGTGATTGAAGAGAATCTTGAGTCTAGAGTCGAAGCTGCTAAGACTGCCAACCATAAAATTACGTCCACTGACTCAAAGGCTTCATGTGTATCTGCTGGCATGCACCCAAGCTCGAAGACAGAGGATATGAAAGTTCACAGTGTTCGCCCTTCAGAAAATATTCTGGCCCTTGTTCGGGATTTTGAGAAGAGCTATTTAACTCTCGTGAAGGATGAACAAGAGTTGATTTCAACTTTGTCAGAAGATAAACTGAAGTTACTCAGCATTTCGAAAGGAAAGCTTATCGACTGCATACGAAAGGCAAATGTCCACAAAACACCGTCAGCTGATGATAAGACCTTCACGTTTGCATTGCTACTAGCAATTAAACAGATGTCATGGTATTTATGTTTCTTTGGTATCCGTGTGGCATATCTCTATCTTAACAAGCTATGTCGGAGCTCAAATCCCATGAAGCTAGGATTGCACACGCTTTACTCTTCATTTGAATCAGAACACATGTCAACTGAGAGAGACATCACTAGATCACATCCATCCCTAGCTGTTATCCAGGGGATTTTACAGTCAAAAGTTGTCCGTGGGAATTCCAAAGCGTTACTTTTGGCGGAGAAAGTTTTTTGGTCCTCGCTGAAGAGGCTATTGGTGTCCATGGGGTTATCTTACAATGAGCTCAACAGTCCGTCCCCAAGTGGAAATCAACTGAATCTTAATGAAGCAACAGCATCTTGTTCCCTGCCAACCACAGACTGTCTGCTTGTCGCTTACGAGCGCATTTCTCCATCTTTTCCTGTGGAGAATTTCAGCGTCATTGTAGAATATGGAGGTCCAAATGCATCCCCCAGAGTCTCATCTCCTTTAAAGTTGGACTCCTTTCCTTGCTTTCATTTTATAAAAGTGGAGCTGGATATGTCCAGTGCGTCCGGGCAACTCTCTGCAGGTGTTACAGTACCTTATAGTCTCAAAATGGTAAAGGGAGATGAATTTGAGATGAAAACTGGGTGGTTGGAAGAAGTGTTGAACTTTGTTCCACTTGACAGTTTGTGTTCCGCTGAATCTTCAGAATCTACGAAGGAATCTAAATTTGACTCCGTGCCTCAAGAATCTAGAAGAAAAATTTGGATAAATGAGCATGGAGTTCTCTCTGACCAAAGAGGTGTGATTGTAGTGAACACAAAAACTGTTGACAAGGAGATGATAATATCCAGAAGAAGTACATATCAAAAGGTCTTGGCAATGGAAAAAGAAGGAGTGCAAGTTGTGGAGCGCGATTCCGATCTACTTGTGGACCTGATGTTAAGTCCTGCGATTTGCCTAGTCTGGTATGATTGTGGAAAGGTTAGTAAAAAGTCGGATGCAACTTTTGGTGCTTCCTCAAGCTCACTTTCATGGATTGGGGATATCGCAACCAATGTTTTGACGTCATTGAGTTTCGGTTTCAGCACCTGTGTTATGGTTTTTGAGGGGGAACCCACTTGCCTGGCTACAGTAATGGACTCTTCTGATGAACTGTATGCCGCAGCTGGCAGCTTGGGAATCAATTTACAGATCTTTTGTTCATCATCAGCTGACTTAACTGATGAGATAATACTGAGGTGTATCAAATCTTCTGTTAAATCTTCACAAGTCCATGCCAAAATGCCTGAGTCAGAATCTCTTGCAGAATCATTTCTCACCAAGTTTCCTTCCGTGAACCCGCTTACAGCTCATGTAATTCTGTCATCTTCTAGATCACTTCTCGAATTCATGAAGCTCCCACATAGTAACAAGGTTCAAATGTTGCAAAAGTACCATGTACCTGAAGAGAGTGTTGAACTCTTCAGTTCATTATGCAGATACGGTGCAAGGGAGGACTCCAAATCTGTAATGACAGACAGCGCTTCTTCTGTATCTTCTGGAGCTGACTCAGACACCCACCATCTCAATGTCCATTCTGATTCGAAAAGGAAACAGTACATTACTGGGAAAGATGAGACTTATATGGAAGACTCGGTCCATTGTGTTCCCTCGACAGAGTTTGCTGGTTCGAAGCGCAAGCCTTCAGGGGATTTCCAACTTGATGATCCTTGGTCATCTAGAGATCATGAGATGTTTCATTTTGACCCTGTCACTGAGTTCCCCGATGCACGTCTCAAACCTTCTGGGATCATTCATCCTAACGACTCTTGGCCATCTAAAGATCCTGAGAGGTTTGAGAACAAGTCAGGACCTGGTTCTTCATCAAAGGACACGTTCTGGGAGACTGATTTTGGAGTCGAGGATAACCTTCCTGGATTTGAAAGTTGGAGTTTCCCCGTTACAGATGAATCCATGAGTCAGAACAGAGGACGCAAGTTTCCTGTGATGGGGAAAGCTAACTTGCACGACACTAGAAACTCAGAGAACTTCATGGGAGACTACAAAGGTGAAGTTATCAACATAGAGGATAGTAAGTTTCTCGAGGAAGATTTCCCTCTTTCTCCTGGTTACAACAGGTTCTCTCCAGTAGTTTCTGATGTTGCTGAAGATCCGAGAAAATCAAAGTCTGCAAGGAAGTTATCTTTCTCTGAACCTATCCAGCCTATCTTCCCAACATCAGCTGAGATTAACTTCAGTTCTGAGAGGCTACCCTCCGGATCCACTACTCCTTGGCGTGGATATGTTGATAAATTCCCAGCAAAACGGCAACGGACTCTTCTGGAAGAAGTCTTAACACGGAGATCTGCAGTTTCCACAACAGATCATCCATTCCAAGAAGAGATATCACATTTTGGTGGATCTCCACTATCAAACGCAATCCGTTCTCCAGATCCAGTACAAGGTTCTCCTTGGACTGTTGATTTTCTCAACAGAGTCAGAGAAAGGAGTACAGAAAGGAAGCAGCAACTATCTCTTCTTTCTCATCTCACTCCCTCTACTCTGGAAACCCGATGTGACCCAAAGAAACCTAATATCAAGAGGAAGAGTCCTTCCATAATAGAGTTTTTCAAGCATAAAGGAGGCAACGCTCGTAGTAGCAGAGTTTCAGAAGAGAGAAAGCAGAAGCGGTTCAAGAATTCTTCAGCCTCGCCACAAAACGAGAGATTTGACTCGCTTCTTAGGTCGTATACGCCAGTTGATAAGCGAGCAAAACAGTCTCTATCTTTCGCTGGGAATGGATCTGGAGGCCAAACAAAACTGGTCTGGAAGTAA

Protein:   MRGRFLNIDYFSTPPSQVYEALGFLNLPAPDDFPAPLFRDPREEFLRFEPIEGFSLPIDNLPIGDALSKFLSDVVPDRVTVDYGAFEMDYSSLGDELRFILGRGDPQFLEKSEGEATEEKVTLDLNIVQLETPEMDLEMENKLSSNIEDLQCLSKVLEIENEPVKFEESDVILQNSSDIKQKIYSVDCISSDYFTENSTSVKEDECFRKNRPWFRDAVFPLLEVDEVNLNELSSLSMLDKIFSVLETIEPRDLDTESSLVINPKELIGSKDYDLLDILSTDCYSNKSVQSDVVPEEIDIVTILEIPNPEESFQFEQGKLAVDVVSVDFEEVQILDVEISDVFGSFLSLPQAAEPEICPGMFSEEMNFKNFDELVVSSELAFADDAFKSMPTPILNDYEITRSLELIYENYLSKIKPQEFPASNDIYLPLNLLEETKHNHEAHFCDYLSEEIVTCNIDYDLESLEGDRWVYDFVLSEDVFCEPLVERCTEPFYGISTLDEHPPVNTSHGLLERLCPETGSRDCGRDDYAKKAALVFKSMSAFDDLTFFMDPQKAVIEENLESRVEAAKTANHKITSTDSKASCVSAGMHPSSKTEDMKVHSVRPSENILALVRDFEKSYLTLVKDEQELISTLSEDKLKLLSISKGKLIDCIRKANVHKTPSADDKTFTFALLLAIKQMSWYLCFFGIRVAYLYLNKLCRSSNPMKLGLHTLYSSFESEHMSTERDITRSHPSLAVIQGILQSKVVRGNSKALLLAEKVFWSSLKRLLVSMGLSYNELNSPSPSGNQLNLNEATASCSLPTTDCLLVAYERISPSFPVENFSVIVEYGGPNASPRVSSPLKLDSFPCFHFIKVELDMSSASGQLSAGVTVPYSLKMVKGDEFEMKTGWLEEVLNFVPLDSLCSAESSESTKESKFDSVPQESRRKIWINEHGVLSDQRGVIVVNTKTVDKEMIISRRSTYQKVLAMEKEGVQVVERDSDLLVDLMLSPAICLVWYDCGKVSKKSDATFGASSSSLSWIGDIATNVLTSLSFGFSTCVMVFEGEPTCLATVMDSSDELYAAAGSLGINLQIFCSSSADLTDEIILRCIKSSVKSSQVHAKMPESESLAESFLTKFPSVNPLTAHVILSSSRSLLEFMKLPHSNKVQMLQKYHVPEESVELFSSLCRYGAREDSKSVMTDSASSVSSGADSDTHHLNVHSDSKRKQYITGKDETYMEDSVHCVPSTEFAGSKRKPSGDFQLDDPWSSRDHEMFHFDPVTEFPDARLKPSGIIHPNDSWPSKDPERFENKSGPGSSSKDTFWETDFGVEDNLPGFESWSFPVTDESMSQNRGRKFPVMGKANLHDTRNSENFMGDYKGEVINIEDSKFLEEDFPLSPGYNRFSPVVSDVAEDPRKSKSARKLSFSEPIQPIFPTSAEINFSSERLPSGSTTPWRGYVDKFPAKRQRTLLEEVLTRRSAVSTTDHPFQEEISHFGGSPLSNAIRSPDPVQGSPWTVDFLNRVRERSTERKQQLSLLSHLTPSTLETRCDPKKPNIKRKSPSIIEFFKHKGGNARSSRVSEERKQKRFKNSSASPQNERFDSLLRSYTPVDKRAKQSLSFAGNGSGGQTKLVWK